Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 CYMP-203ENST00000474680 1263 ntBASIC19.68■□□□□ 0.74
SLF1Q9BQI6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 AC005412.3-201ENST00000580309 715 ntBASIC19.68■□□□□ 0.74
SLF1Q9BQI6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 AC022145.2-201ENST00000598203 171 ntBASIC19.68■□□□□ 0.74
SLF1Q9BQI6 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 EGFEM1P-202ENST00000431685 1563 ntBASIC19.68■□□□□ 0.74
SLF1Q9BQI6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 OR6D1P-202ENST00000641007 5290 ntBASIC19.68■□□□□ 0.74
SLF1Q9BQI6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLF1Q9BQI6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 TSEN15P1-201ENST00000423257 515 ntBASIC19.67■□□□□ 0.74
SLF1Q9BQI6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 AL645939.2-201ENST00000427340 991 ntBASIC19.67■□□□□ 0.74
SLF1Q9BQI6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 AC099522.2-201ENST00000607001 744 ntBASIC19.67■□□□□ 0.74
SLF1Q9BQI6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.67■□□□□ 0.74
SLF1Q9BQI6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
SLF1Q9BQI6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 AL355306.1-201ENST00000415580 579 ntBASIC19.66■□□□□ 0.74
SLF1Q9BQI6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.66■□□□□ 0.74
SLF1Q9BQI6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms