Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NOTCH4Q99466 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 HLA-H-201ENST00000383620 1096 ntBASIC17.26■□□□□ 0.35
NOTCH4Q99466 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.26■□□□□ 0.35
NOTCH4Q99466 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.26■□□□□ 0.35
NOTCH4Q99466 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.26■□□□□ 0.35
NOTCH4Q99466 MPDU1-223ENST00000582151 728 ntBASIC17.26■□□□□ 0.35
NOTCH4Q99466 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.26■□□□□ 0.35
NOTCH4Q99466 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.26■□□□□ 0.35
NOTCH4Q99466 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.26■□□□□ 0.35
NOTCH4Q99466 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NOTCH4Q99466 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 SPTLC1P1-201ENST00000447199 261 ntBASIC17.25■□□□□ 0.35
NOTCH4Q99466 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH4Q99466 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.25■□□□□ 0.35
NOTCH4Q99466 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH4Q99466 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH4Q99466 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH4Q99466 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH4Q99466 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH4Q99466 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH4Q99466 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.24■□□□□ 0.35
NOTCH4Q99466 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH4Q99466 MTND6P24-201ENST00000440466 518 ntBASIC17.24■□□□□ 0.35
NOTCH4Q99466 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 AL662799.1-202ENST00000614205 422 ntBASIC17.24■□□□□ 0.35
NOTCH4Q99466 SPTSSB-204ENST00000617024 1292 ntBASIC17.24■□□□□ 0.35
NOTCH4Q99466 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 AL133373.2-201ENST00000623187 2828 ntBASIC17.24■□□□□ 0.35
NOTCH4Q99466 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH4Q99466 AC068880.1-201ENST00000507289 2297 ntBASIC17.24■□□□□ 0.35
NOTCH4Q99466 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH4Q99466 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 TUBB8P12-201ENST00000308911 1335 ntBASIC17.24■□□□□ 0.35
NOTCH4Q99466 TUBB7P-202ENST00000428444 1305 ntBASIC17.24■□□□□ 0.35
NOTCH4Q99466 TUBB8P7-204ENST00000567960 1332 ntBASIC17.24■□□□□ 0.35
NOTCH4Q99466 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH4Q99466 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH4Q99466 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
NOTCH4Q99466 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.23■□□□□ 0.35
NOTCH4Q99466 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH4Q99466 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 API5-211ENST00000534695 560 ntTSL 5 BASIC17.23■□□□□ 0.35
NOTCH4Q99466 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms