Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPENQ96T58 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SPENQ96T58 AC135050.7-201ENST00000624508 2218 ntBASIC15.1■□□□□ 0.01
SPENQ96T58 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPENQ96T58 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPENQ96T58 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.1■□□□□ 0.01
SPENQ96T58 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SPENQ96T58 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.1■□□□□ 0.01
SPENQ96T58 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SPENQ96T58 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.1■□□□□ 0.01
SPENQ96T58 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPENQ96T58 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SPENQ96T58 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.1■□□□□ 0.01
SPENQ96T58 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPENQ96T58 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.1■□□□□ 0.01
SPENQ96T58 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SPENQ96T58 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SPENQ96T58 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SPENQ96T58 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPENQ96T58 AC007967.4-201ENST00000614700 386 ntBASIC15.1■□□□□ 0.01
SPENQ96T58 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.1■□□□□ 0.01
SPENQ96T58 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SPENQ96T58 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.09■□□□□ 0.01
SPENQ96T58 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
SPENQ96T58 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 MIR658-201ENST00000385210 100 ntBASIC15.09■□□□□ 0.01
SPENQ96T58 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SPENQ96T58 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.09■□□□□ 0.01
SPENQ96T58 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.09■□□□□ 0.01
SPENQ96T58 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.09■□□□□ 0.01
SPENQ96T58 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 AC027307.2-201ENST00000591252 911 ntBASIC15.09■□□□□ 0.01
SPENQ96T58 AC139713.2-201ENST00000641328 2723 ntBASIC15.09■□□□□ 0.01
SPENQ96T58 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.09■□□□□ 0.01
SPENQ96T58 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.09■□□□□ 0.01
SPENQ96T58 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.09■□□□□ 0.01
SPENQ96T58 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SPENQ96T58 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.09■□□□□ 0.01
SPENQ96T58 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.09■□□□□ 0.01
SPENQ96T58 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.09■□□□□ 0.01
SPENQ96T58 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.09■□□□□ 0.01
SPENQ96T58 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SPENQ96T58 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SPENQ96T58 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPENQ96T58 RNU1-129P-201ENST00000384064 167 ntBASIC15.08■□□□□ 0.01
SPENQ96T58 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.08■□□□□ 0.01
SPENQ96T58 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.08■□□□□ 0.01
SPENQ96T58 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SPENQ96T58 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.08■□□□□ 0.01
SPENQ96T58 U1.21-201ENST00000580816 167 ntBASIC15.08■□□□□ 0.01
SPENQ96T58 CTBP2P3-201ENST00000585629 1255 ntBASIC15.08■□□□□ 0.01
SPENQ96T58 AL844908.2-201ENST00000609461 460 ntBASIC15.08■□□□□ 0.01
SPENQ96T58 AL590560.3-201ENST00000623350 461 ntBASIC15.08■□□□□ 0.01
SPENQ96T58 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.08■□□□□ 0.01
SPENQ96T58 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.08■□□□□ 0.01
SPENQ96T58 AL354751.1-201ENST00000412768 1863 ntBASIC15.08■□□□□ 0.01
SPENQ96T58 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SPENQ96T58 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.08■□□□□ 0.01
SPENQ96T58 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SPENQ96T58 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SPENQ96T58 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SPENQ96T58 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.08■□□□□ 0
SPENQ96T58 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SPENQ96T58 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.08■□□□□ 0
SPENQ96T58 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SPENQ96T58 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SPENQ96T58 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.08■□□□□ 0
SPENQ96T58 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.08■□□□□ 0
SPENQ96T58 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SPENQ96T58 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.08■□□□□ 0
SPENQ96T58 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SPENQ96T58 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
SPENQ96T58 HCG4-201ENST00000418983 998 ntBASIC15.08■□□□□ 0
SPENQ96T58 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.08■□□□□ 0
SPENQ96T58 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.08■□□□□ 0
SPENQ96T58 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SPENQ96T58 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SPENQ96T58 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SPENQ96T58 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SPENQ96T58 CDC14C-201ENST00000428251 1719 ntBASIC15.08■□□□□ 0
SPENQ96T58 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SPENQ96T58 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.07■□□□□ 0
SPENQ96T58 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms