Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 AC073592.8-201ENST00000624126 511 ntBASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 AC087163.2-201ENST00000457299 853 ntBASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 AC018665.1-201ENST00000622927 1362 ntBASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 ZNF890P-202ENST00000530367 1156 ntBASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 AL135999.2-201ENST00000622438 1686 ntBASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 CDC14C-201ENST00000428251 1719 ntBASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.28□□□□□ -0.12
CSMD1Q96PZ7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 AC006538.1-201ENST00000567905 1585 ntBASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 SPDYE19P-201ENST00000338590 713 ntBASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD1Q96PZ7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms