Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RN7SL510P-201ENST00000581311 263 ntBASIC16.09■□□□□ 0.17
COL21A1Q96P44 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 AC009336.1-201ENST00000608941 1553 ntBASIC16.09■□□□□ 0.17
COL21A1Q96P44 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
COL21A1Q96P44 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
COL21A1Q96P44 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
COL21A1Q96P44 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
COL21A1Q96P44 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL21A1Q96P44 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL21A1Q96P44 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL21A1Q96P44 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.08■□□□□ 0.17
COL21A1Q96P44 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
COL21A1Q96P44 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.17
COL21A1Q96P44 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL21A1Q96P44 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 SPDYE21P-201ENST00000413323 827 ntBASIC16.08■□□□□ 0.16
COL21A1Q96P44 AL020989.1-201ENST00000422979 469 ntBASIC16.08■□□□□ 0.16
COL21A1Q96P44 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 AF238378.1-201ENST00000526806 358 ntBASIC16.08■□□□□ 0.16
COL21A1Q96P44 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.08■□□□□ 0.16
COL21A1Q96P44 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 AC011270.2-201ENST00000624293 2550 ntBASIC16.08■□□□□ 0.16
COL21A1Q96P44 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 AC079776.2-201ENST00000641154 1609 ntBASIC16.08■□□□□ 0.16
COL21A1Q96P44 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL21A1Q96P44 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.08■□□□□ 0.16
COL21A1Q96P44 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 AC092068.3-201ENST00000587894 2016 ntBASIC16.07■□□□□ 0.16
COL21A1Q96P44 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
COL21A1Q96P44 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
COL21A1Q96P44 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
COL21A1Q96P44 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.07■□□□□ 0.16
COL21A1Q96P44 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
COL21A1Q96P44 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.07■□□□□ 0.16
COL21A1Q96P44 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 FAAHP1-202ENST00000446499 1238 ntBASIC16.07■□□□□ 0.16
COL21A1Q96P44 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
COL21A1Q96P44 FGFR3P6-201ENST00000457012 610 ntBASIC16.07■□□□□ 0.16
COL21A1Q96P44 SCARNA2-201ENST00000458748 420 ntBASIC16.07■□□□□ 0.16
COL21A1Q96P44 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.07■□□□□ 0.16
COL21A1Q96P44 AL139288.1-201ENST00000623748 933 ntBASIC16.07■□□□□ 0.16
COL21A1Q96P44 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 SIGLEC16-201ENST00000599858 1437 ntBASIC16.07■□□□□ 0.16
COL21A1Q96P44 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.07■□□□□ 0.16
COL21A1Q96P44 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL21A1Q96P44 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
COL21A1Q96P44 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms