Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.47■□□□□ 0.39
RPRD1AQ96P16 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 RHOQP3-201ENST00000437982 621 ntBASIC17.47■□□□□ 0.39
RPRD1AQ96P16 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 AC023141.13-201ENST00000604991 943 ntBASIC17.47■□□□□ 0.39
RPRD1AQ96P16 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 AC007064.4-201ENST00000637740 555 ntBASIC17.47■□□□□ 0.39
RPRD1AQ96P16 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 TOP3BP1-201ENST00000420768 1380 ntBASIC17.47■□□□□ 0.39
RPRD1AQ96P16 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.47■□□□□ 0.39
RPRD1AQ96P16 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 AC002347.1-201ENST00000569543 541 ntBASIC17.46■□□□□ 0.39
RPRD1AQ96P16 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPRD1AQ96P16 KRT8P49-201ENST00000604166 1432 ntBASIC17.46■□□□□ 0.39
RPRD1AQ96P16 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
RPRD1AQ96P16 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 AC005412.3-201ENST00000580309 715 ntBASIC17.45■□□□□ 0.38
RPRD1AQ96P16 AL513190.1-201ENST00000621254 727 ntBASIC17.45■□□□□ 0.38
RPRD1AQ96P16 AC092865.6-201ENST00000642101 219 ntBASIC17.45■□□□□ 0.38
RPRD1AQ96P16 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 AC025580.3-201ENST00000617932 1424 ntBASIC17.45■□□□□ 0.38
RPRD1AQ96P16 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 TUBB8P12-201ENST00000308911 1335 ntBASIC17.45■□□□□ 0.38
RPRD1AQ96P16 TUBB7P-202ENST00000428444 1305 ntBASIC17.45■□□□□ 0.38
RPRD1AQ96P16 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 TUBB8P7-204ENST00000567960 1332 ntBASIC17.45■□□□□ 0.38
RPRD1AQ96P16 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPRD1AQ96P16 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RPRD1AQ96P16 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms