Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
CCDC17Q96LX7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC17Q96LX7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC17Q96LX7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 AL512356.2-201ENST00000546955 174 ntBASIC19.68■□□□□ 0.74
CCDC17Q96LX7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 AC006277.1-201ENST00000624348 1610 ntBASIC19.68■□□□□ 0.74
CCDC17Q96LX7 LINC00895-201ENST00000629028 1637 ntBASIC19.68■□□□□ 0.74
CCDC17Q96LX7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC17Q96LX7 AC141586.5-201ENST00000624546 2050 ntBASIC19.67■□□□□ 0.74
CCDC17Q96LX7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 FAM58DP-201ENST00000428076 619 ntBASIC19.67■□□□□ 0.74
CCDC17Q96LX7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.67■□□□□ 0.74
CCDC17Q96LX7 AC106028.4-201ENST00000614509 607 ntBASIC19.67■□□□□ 0.74
CCDC17Q96LX7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC17Q96LX7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 AC016027.1-202ENST00000607927 1699 ntBASIC19.66■□□□□ 0.74
CCDC17Q96LX7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 AC138932.1-201ENST00000534164 6830 ntBASIC19.66■□□□□ 0.74
CCDC17Q96LX7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 AP001059.3-201ENST00000619053 235 ntBASIC19.66■□□□□ 0.74
CCDC17Q96LX7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms