Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 GPALPP1-207ENST00000611650 899 ntBASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 AC091812.2-201ENST00000619081 385 ntBASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 AC139530.3-201ENST00000620344 690 ntBASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 AC112191.1-201ENST00000523689 701 ntBASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 AP002472.1-201ENST00000577490 586 ntBASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 AC106820.2-201ENST00000563775 3264 ntBASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMARCD1Q96GM5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 YBX1P5-201ENST00000509441 847 ntBASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 MIR4492-201ENST00000581627 80 ntBASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMARCD1Q96GM5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 AC002056.1-201ENST00000395613 760 ntBASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 AP002490.2-201ENST00000524791 560 ntBASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 CYP2A7P1-201ENST00000595391 815 ntBASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 PCDHB17P-201ENST00000539533 2393 ntBASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMARCD1Q96GM5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SMARCD1Q96GM5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.77■□□□□ 0.43
SMARCD1Q96GM5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
SMARCD1Q96GM5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms