Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AC073508.3-201ENST00000619697 1419 ntBASIC16.18■□□□□ 0.18
LRRC58Q96CX6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 FER1L4-210ENST00000615531 5998 ntBASIC16.17■□□□□ 0.18
LRRC58Q96CX6 AC006538.1-201ENST00000567905 1585 ntBASIC16.17■□□□□ 0.18
LRRC58Q96CX6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 DUX4L17-201ENST00000557360 1267 ntBASIC16.17■□□□□ 0.18
LRRC58Q96CX6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 AC005363.2-201ENST00000618631 242 ntBASIC16.17■□□□□ 0.18
LRRC58Q96CX6 AC133561.5-201ENST00000635547 218 ntBASIC16.17■□□□□ 0.18
LRRC58Q96CX6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC58Q96CX6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 LINC00895-201ENST00000629028 1637 ntBASIC16.16■□□□□ 0.18
LRRC58Q96CX6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 AC005052.1-201ENST00000625181 2492 ntBASIC16.16■□□□□ 0.18
LRRC58Q96CX6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 TSPY22P-201ENST00000427496 604 ntBASIC16.16■□□□□ 0.18
LRRC58Q96CX6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 KRT18P21-201ENST00000515767 1272 ntBASIC16.16■□□□□ 0.18
LRRC58Q96CX6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 AC010331.1-201ENST00000611423 582 ntBASIC16.16■□□□□ 0.18
LRRC58Q96CX6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms