Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 YBX2P1-201ENST00000394192 760 ntBASIC16.82■□□□□ 0.28
SCAMP4Q969E2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 PDPK2P-202ENST00000562415 1191 ntBASIC16.82■□□□□ 0.28
SCAMP4Q969E2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAMP4Q969E2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 KRT18P13-201ENST00000400056 1290 ntBASIC16.8■□□□□ 0.28
SCAMP4Q969E2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 AC005412.3-201ENST00000580309 715 ntBASIC16.8■□□□□ 0.28
SCAMP4Q969E2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 AC010327.4-202ENST00000591484 748 ntBASIC16.8■□□□□ 0.28
SCAMP4Q969E2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 AL121761.2-201ENST00000598007 1648 ntBASIC16.8■□□□□ 0.28
SCAMP4Q969E2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAMP4Q969E2 AL353732.1-201ENST00000569618 1459 ntBASIC16.8■□□□□ 0.28
SCAMP4Q969E2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCAMP4Q969E2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms