Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 LINC00895-201ENST00000629028 1637 ntBASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 AL136379.1-201ENST00000623471 2642 ntBASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CKAP2Q8WWK9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 KRT8P10-201ENST00000450021 1447 ntBASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 HMGA1P5-201ENST00000412453 271 ntBASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 ECEL1P3-201ENST00000427961 737 ntBASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 AC122714.2-201ENST00000502787 707 ntBASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.9■□□□□ 0.3
CKAP2Q8WWK9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CKAP2Q8WWK9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CKAP2Q8WWK9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CKAP2Q8WWK9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CKAP2Q8WWK9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CKAP2Q8WWK9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 DUX4L17-201ENST00000557360 1267 ntBASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKAP2Q8WWK9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.88■□□□□ 0.29
CKAP2Q8WWK9 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKAP2Q8WWK9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.88■□□□□ 0.29
CKAP2Q8WWK9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKAP2Q8WWK9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CKAP2Q8WWK9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.88■□□□□ 0.29
CKAP2Q8WWK9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CKAP2Q8WWK9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms