Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 NME2P1-201ENST00000426182 414 ntBASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 AC025048.6-201ENST00000634326 1161 ntBASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.4■□□□□ 0.7
U2AF1L4Q8WU68 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
U2AF1L4Q8WU68 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.39■□□□□ 0.7
U2AF1L4Q8WU68 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
U2AF1L4Q8WU68 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
U2AF1L4Q8WU68 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
U2AF1L4Q8WU68 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
U2AF1L4Q8WU68 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
U2AF1L4Q8WU68 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 AC140658.5-201ENST00000438532 169 ntBASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 IGHV3-52-201ENST00000519770 353 ntBASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 AL596325.1-201ENST00000563991 1082 ntBASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
U2AF1L4Q8WU68 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 AC008677.1-201ENST00000519230 1561 ntBASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 AL590787.1-201ENST00000568856 1315 ntBASIC19.38■□□□□ 0.69
U2AF1L4Q8WU68 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms