Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GRIN3AQ8TCU5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GRIN3AQ8TCU5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
GRIN3AQ8TCU5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GRIN3AQ8TCU5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GRIN3AQ8TCU5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GRIN3AQ8TCU5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GRIN3AQ8TCU5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GRIN3AQ8TCU5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GRIN3AQ8TCU5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.32■□□□□ 0.36
GRIN3AQ8TCU5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GRIN3AQ8TCU5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GRIN3AQ8TCU5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 AC002347.1-201ENST00000569543 541 ntBASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 AC010507.1-201ENST00000633895 436 ntBASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GRIN3AQ8TCU5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 AC010327.4-202ENST00000591484 748 ntBASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GRIN3AQ8TCU5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 CICP6-201ENST00000457191 2729 ntBASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 AC011270.2-201ENST00000624293 2550 ntBASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 MIR1233-2-201ENST00000408138 82 ntBASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 MIR1233-1-201ENST00000408722 82 ntBASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 AC087163.2-201ENST00000457299 853 ntBASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.29■□□□□ 0.36
GRIN3AQ8TCU5 GPALPP1-207ENST00000611650 899 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms