Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AP001350.2-201ENST00000625104 1094 ntBASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 TOP3BP1-201ENST00000420768 1380 ntBASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 AL021578.1-201ENST00000613646 709 ntBASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 SPDYE17-201ENST00000412399 783 ntBASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 RPL7P3-201ENST00000441388 714 ntBASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 KLF2P4-201ENST00000451959 1225 ntBASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 BTNL10-201ENST00000595971 695 ntBASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 MIR1247-201ENST00000408206 136 ntBASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC11.23□□□□□ -0.61
ALMS1Q8TCU4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 MIR663B-201ENST00000408361 115 ntBASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 CSF2RBP1-201ENST00000447905 391 ntBASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 KRT18P34-201ENST00000488218 1270 ntBASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 AC098859.1-201ENST00000502915 1238 ntBASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 LINC01451-201ENST00000623792 534 ntBASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ALMS1Q8TCU4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms