Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 PRYP5-201ENST00000451909 266 ntBASIC17.49■□□□□ 0.39
PAF1Q8N7H5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 AC092910.1-201ENST00000482027 1129 ntBASIC17.49■□□□□ 0.39
PAF1Q8N7H5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 LINC00896-202ENST00000609602 2128 ntBASIC17.49■□□□□ 0.39
PAF1Q8N7H5 AL589182.2-201ENST00000619332 1049 ntBASIC17.49■□□□□ 0.39
PAF1Q8N7H5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 AC107918.4-202ENST00000641623 219 ntBASIC17.49■□□□□ 0.39
PAF1Q8N7H5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 LINC00982-205ENST00000420957 435 ntBASIC17.48■□□□□ 0.39
PAF1Q8N7H5 AC018712.1-201ENST00000455767 687 ntBASIC17.48■□□□□ 0.39
PAF1Q8N7H5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 AL138688.1-201ENST00000624851 1594 ntBASIC17.48■□□□□ 0.39
PAF1Q8N7H5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAF1Q8N7H5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 AC105339.3-201ENST00000560043 636 ntBASIC17.47■□□□□ 0.39
PAF1Q8N7H5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 FAM215A-202ENST00000632077 792 ntBASIC17.47■□□□□ 0.39
PAF1Q8N7H5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms