Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIML2Q8N7C3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIML2Q8N7C3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIML2Q8N7C3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIML2Q8N7C3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIML2Q8N7C3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRIML2Q8N7C3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIML2Q8N7C3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRIML2Q8N7C3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIML2Q8N7C3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIML2Q8N7C3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIML2Q8N7C3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIML2Q8N7C3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIML2Q8N7C3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 AC060834.1-201ENST00000443027 2032 ntBASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIML2Q8N7C3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 AL645929.1-201ENST00000420084 975 ntBASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 AC063952.2-201ENST00000498792 1227 ntBASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 AC111152.3-201ENST00000569699 673 ntBASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 AC022188.1-201ENST00000620960 1664 ntBASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIML2Q8N7C3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 AC211429.1-201ENST00000415277 523 ntBASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 AL671277.2-201ENST00000458060 996 ntBASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIML2Q8N7C3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms