Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 AC005034.1-201ENST00000426657 489 ntBASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 AL035252.4-201ENST00000624174 288 ntBASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
SYNPOQ8N3V7 UXT-AS1-201ENST00000590504 1525 ntBASIC17.21■□□□□ 0.34
SYNPOQ8N3V7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
SYNPOQ8N3V7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 HCG4-201ENST00000418983 998 ntBASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 AC005225.4-201ENST00000557330 545 ntBASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPOQ8N3V7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 AL353732.1-201ENST00000569618 1459 ntBASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 SPDYE14P-201ENST00000442619 822 ntBASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 AL512638.1-201ENST00000457493 794 ntBASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 AC012645.4-201ENST00000610691 1061 ntBASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 WASH6P-202ENST00000359512 1437 ntBASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.19■□□□□ 0.34
SYNPOQ8N3V7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms