Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 AC092902.6-201ENST00000641783 218 ntBASIC18.42■□□□□ 0.54
VPS52Q8N1B4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 TSEN15P1-201ENST00000423257 515 ntBASIC18.41■□□□□ 0.54
VPS52Q8N1B4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 AC068137.2-201ENST00000605408 478 ntBASIC18.41■□□□□ 0.54
VPS52Q8N1B4 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 AC093028.1-201ENST00000622998 982 ntBASIC18.41■□□□□ 0.54
VPS52Q8N1B4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS52Q8N1B4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 FAM185BP-201ENST00000443595 716 ntBASIC18.4■□□□□ 0.54
VPS52Q8N1B4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 MIR3197-201ENST00000582241 73 ntBASIC18.4■□□□□ 0.54
VPS52Q8N1B4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 AL135999.2-201ENST00000622438 1686 ntBASIC18.4■□□□□ 0.54
VPS52Q8N1B4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS52Q8N1B4 AC046185.3-201ENST00000623228 1824 ntBASIC18.39■□□□□ 0.54
VPS52Q8N1B4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.39■□□□□ 0.54
VPS52Q8N1B4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
VPS52Q8N1B4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VPS52Q8N1B4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.39■□□□□ 0.54
VPS52Q8N1B4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.39■□□□□ 0.54
VPS52Q8N1B4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.39■□□□□ 0.54
VPS52Q8N1B4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VPS52Q8N1B4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.39■□□□□ 0.53
VPS52Q8N1B4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS52Q8N1B4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS52Q8N1B4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS52Q8N1B4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS52Q8N1B4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS52Q8N1B4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
VPS52Q8N1B4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.39■□□□□ 0.53
VPS52Q8N1B4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS52Q8N1B4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.39■□□□□ 0.53
VPS52Q8N1B4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms