Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 AP002414.1-201ENST00000391405 1147 ntBASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 AC022616.7-201ENST00000525383 220 ntBASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 LINC01238-205ENST00000567549 1107 ntBASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 AL139011.1-202ENST00000642063 584 ntBASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 AL365203.3-201ENST00000609742 2057 ntBASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC170Q8IYT3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 AL020989.1-201ENST00000422979 469 ntBASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 AP005901.3-202ENST00000581653 237 ntBASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 INTS4P1-201ENST00000438455 1935 ntBASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC170Q8IYT3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 PKD1P5-201ENST00000532415 10291 ntBASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC170Q8IYT3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms