Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A2Q8IWA5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLC44A2Q8IWA5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC44A2Q8IWA5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
SLC44A2Q8IWA5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC44A2Q8IWA5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A2Q8IWA5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC44A2Q8IWA5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC44A2Q8IWA5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC44A2Q8IWA5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.21■□□□□ 0.18
SLC44A2Q8IWA5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
SLC44A2Q8IWA5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SLC44A2Q8IWA5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SLC44A2Q8IWA5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.21■□□□□ 0.18
SLC44A2Q8IWA5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SLC44A2Q8IWA5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 AC132938.5-201ENST00000624980 1813 ntBASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 AC046158.3-201ENST00000624947 2558 ntBASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 KLF4P1-201ENST00000412782 1185 ntBASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 ABCD1P5-201ENST00000445663 754 ntBASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A2Q8IWA5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 AC003669.1-201ENST00000334569 611 ntBASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 SLC25A1P3-201ENST00000395415 828 ntBASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 TSPY19P-201ENST00000418461 509 ntBASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 TSPY18P-201ENST00000441642 509 ntBASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 AC105020.1-201ENST00000435356 2205 ntBASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A2Q8IWA5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms