Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB43Q86YS6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAB43Q86YS6 GPR89P-201ENST00000407924 1495 ntBASIC16.28■□□□□ 0.2
RAB43Q86YS6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RAB43Q86YS6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB43Q86YS6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB43Q86YS6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB43Q86YS6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB43Q86YS6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB43Q86YS6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB43Q86YS6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB43Q86YS6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB43Q86YS6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RAB43Q86YS6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB43Q86YS6 AC097637.2-201ENST00000624096 1997 ntBASIC16.27■□□□□ 0.2
RAB43Q86YS6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB43Q86YS6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB43Q86YS6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB43Q86YS6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB43Q86YS6 AC138028.4-201ENST00000564984 1845 ntBASIC16.27■□□□□ 0.2
RAB43Q86YS6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RAB43Q86YS6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RAB43Q86YS6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB43Q86YS6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB43Q86YS6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB43Q86YS6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB43Q86YS6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB43Q86YS6 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.27■□□□□ 0.2
RAB43Q86YS6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.27■□□□□ 0.2
RAB43Q86YS6 VN2R19P-201ENST00000442399 1052 ntBASIC16.27■□□□□ 0.2
RAB43Q86YS6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB43Q86YS6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB43Q86YS6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB43Q86YS6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB43Q86YS6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
RAB43Q86YS6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB43Q86YS6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB43Q86YS6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RAB43Q86YS6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB43Q86YS6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB43Q86YS6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.27■□□□□ 0.19
RAB43Q86YS6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB43Q86YS6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.27■□□□□ 0.19
RAB43Q86YS6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.27■□□□□ 0.19
RAB43Q86YS6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB43Q86YS6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB43Q86YS6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB43Q86YS6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 MRPL20P1-201ENST00000400819 433 ntBASIC16.26■□□□□ 0.19
RAB43Q86YS6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 AC004967.1-201ENST00000453589 447 ntBASIC16.26■□□□□ 0.19
RAB43Q86YS6 AC112482.1-201ENST00000492080 688 ntBASIC16.26■□□□□ 0.19
RAB43Q86YS6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 GGTLC5P-201ENST00000617623 998 ntBASIC16.26■□□□□ 0.19
RAB43Q86YS6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 PKD1P5-201ENST00000532415 10291 ntBASIC16.26■□□□□ 0.19
RAB43Q86YS6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB43Q86YS6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB43Q86YS6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB43Q86YS6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RAB43Q86YS6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
RAB43Q86YS6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB43Q86YS6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB43Q86YS6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB43Q86YS6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB43Q86YS6 FLJ13224-201ENST00000313737 1514 ntBASIC16.25■□□□□ 0.19
RAB43Q86YS6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RAB43Q86YS6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB43Q86YS6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB43Q86YS6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB43Q86YS6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB43Q86YS6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms