Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 AC078925.2-201ENST00000624013 1973 ntBASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 RPS2P28-201ENST00000314255 741 ntBASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 UNC93B6-202ENST00000528242 690 ntBASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 AC005593.1-201ENST00000624894 515 ntBASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RAB11FIP4Q86YS3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 AC084018.2-201ENST00000613093 2607 ntBASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 AC020916.1-201ENST00000587762 1774 ntBASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 IGHV3-22-201ENST00000520721 359 ntBASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 AC124947.2-201ENST00000547118 1133 ntBASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 IL9RP2-201ENST00000423948 1312 ntBASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 AC002310.6-201ENST00000624451 1377 ntBASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB11FIP4Q86YS3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 AL590627.1-203ENST00000421194 1026 ntBASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 AC108751.1-201ENST00000490852 363 ntBASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 AC093909.1-201ENST00000504731 1122 ntBASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 IGHV3-65-201ENST00000523210 341 ntBASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 OR7E47P-204ENST00000575924 449 ntBASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 AC008667.4-201ENST00000607370 168 ntBASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 AC120114.3-201ENST00000611923 658 ntBASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB11FIP4Q86YS3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms