Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 RPL13AP23-201ENST00000480739 586 ntBASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 SLC25A6P2-201ENST00000497974 877 ntBASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 DUX4L17-201ENST00000557360 1267 ntBASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD3Q7Z3D4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 AC104109.2-201ENST00000602919 1418 ntBASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 AC002310.6-201ENST00000624451 1377 ntBASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 Z83851.2-201ENST00000609564 659 ntBASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD3Q7Z3D4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 CICP6-201ENST00000457191 2729 ntBASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 MRPL20P1-201ENST00000400819 433 ntBASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 AC145285.3-201ENST00000564603 959 ntBASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 MIR4751-201ENST00000578027 74 ntBASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD3Q7Z3D4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms