Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC125634.1-201ENST00000438758 1403 ntBASIC15.41■□□□□ 0.06
SHFQ7M4L6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 ALOX12P2-203ENST00000570921 1945 ntBASIC15.41■□□□□ 0.06
SHFQ7M4L6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.41■□□□□ 0.06
SHFQ7M4L6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHFQ7M4L6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 HLA-A-202ENST00000376806 1854 ntBASIC15.4■□□□□ 0.06
SHFQ7M4L6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 FAM220CP-201ENST00000395253 831 ntBASIC15.4■□□□□ 0.06
SHFQ7M4L6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 AC022616.7-201ENST00000525383 220 ntBASIC15.4■□□□□ 0.06
SHFQ7M4L6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SHFQ7M4L6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHFQ7M4L6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 FRMD8P1-201ENST00000440433 1524 ntBASIC15.39■□□□□ 0.05
SHFQ7M4L6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 AL353801.3-201ENST00000609898 542 ntBASIC15.39■□□□□ 0.05
SHFQ7M4L6 AL592071.1-201ENST00000611956 408 ntBASIC15.39■□□□□ 0.05
SHFQ7M4L6 IGHV3-41-201ENST00000613121 348 ntBASIC15.39■□□□□ 0.05
SHFQ7M4L6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
SHFQ7M4L6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHFQ7M4L6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHFQ7M4L6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.38■□□□□ 0.05
SHFQ7M4L6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.38■□□□□ 0.05
SHFQ7M4L6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHFQ7M4L6 AL513523.2-202ENST00000427283 2040 ntBASIC15.38■□□□□ 0.05
SHFQ7M4L6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SHFQ7M4L6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHFQ7M4L6 KRT8P10-201ENST00000450021 1447 ntBASIC15.38■□□□□ 0.05
SHFQ7M4L6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms