Protein–RNA interactions for Protein: Q6PEY2

TUBA3E, Tubulin alpha-3E chain, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3EQ6PEY2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA3EQ6PEY2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA3EQ6PEY2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBA3EQ6PEY2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA3EQ6PEY2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA3EQ6PEY2 AL049757.1-201ENST00000616842 1596 ntBASIC16.17■□□□□ 0.18
TUBA3EQ6PEY2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA3EQ6PEY2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TUBA3EQ6PEY2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA3EQ6PEY2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 PRYP5-201ENST00000451909 266 ntBASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 AC117500.6-201ENST00000624871 588 ntBASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 AC009949.1-201ENST00000623048 1830 ntBASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 AC104109.2-201ENST00000602919 1418 ntBASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 PCDHA14-201ENST00000506751 2298 ntBASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA3EQ6PEY2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 MIR940-201ENST00000401276 94 ntBASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 AL020989.1-201ENST00000422979 469 ntBASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 DDX43P3-201ENST00000441064 443 ntBASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 POLD2P1-201ENST00000511220 997 ntBASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 AC145285.3-201ENST00000564603 959 ntBASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 AP002414.3-201ENST00000589352 1468 ntBASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA3EQ6PEY2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TUBA3EQ6PEY2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.14■□□□□ 0.18
TUBA3EQ6PEY2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.14■□□□□ 0.18
TUBA3EQ6PEY2 BX276092.7-203ENST00000637198 1536 ntBASIC16.14■□□□□ 0.18
TUBA3EQ6PEY2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBA3EQ6PEY2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA3EQ6PEY2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TUBA3EQ6PEY2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBA3EQ6PEY2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA3EQ6PEY2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.14■□□□□ 0.17
TUBA3EQ6PEY2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBA3EQ6PEY2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA3EQ6PEY2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA3EQ6PEY2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms