Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RN7SL828P-201ENST00000607615 303 ntBASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 SPTSSB-204ENST00000617024 1292 ntBASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 RPL37AP1-201ENST00000412502 279 ntBASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 ARSEP1-201ENST00000420443 635 ntBASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 U91328.1-201ENST00000437528 223 ntBASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 API5-211ENST00000534695 560 ntTSL 5 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNKSR3Q6P9H4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 AC098614.1-201ENST00000368528 745 ntBASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 AC138969.3-201ENST00000546612 1459 ntBASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 AC138932.2-201ENST00000548268 1459 ntBASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 AC126755.4-201ENST00000549796 1459 ntBASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.06■□□□□ 0.48
CNKSR3Q6P9H4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 GPR53P-205ENST00000457298 1084 ntBASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.05■□□□□ 0.48
CNKSR3Q6P9H4 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms