Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 MRPL3P1-201ENST00000400109 1033 ntBASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 IGHV3-65-201ENST00000523210 341 ntBASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 AC107918.2-201ENST00000530817 355 ntBASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 AC013467.2-201ENST00000605472 835 ntBASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 MIR7706-201ENST00000613747 67 ntBASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 RNA5SP419-201ENST00000515908 135 ntBASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 MIR1199-201ENST00000621445 119 ntBASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CREB3L3Q68CJ9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CREB3L3Q68CJ9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CREB3L3Q68CJ9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CREB3L3Q68CJ9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CREB3L3Q68CJ9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 AL031284.1-201ENST00000419297 478 ntBASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 MIR4492-201ENST00000581627 80 ntBASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 MPDU1-223ENST00000582151 728 ntBASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 AL773604.1-201ENST00000617417 272 ntBASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 GGTLC5P-201ENST00000617623 998 ntBASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CREB3L3Q68CJ9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 SNX33P1-201ENST00000592116 1762 ntBASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 PCDHB19P-201ENST00000570871 2371 ntBASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 RPS2P28-201ENST00000314255 741 ntBASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.13■□□□□ 0.81
CREB3L3Q68CJ9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms