Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TTC39BQ5VTQ0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.7■□□□□ 0.42
TTC39BQ5VTQ0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TTC39BQ5VTQ0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.7■□□□□ 0.42
TTC39BQ5VTQ0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TTC39BQ5VTQ0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.7■□□□□ 0.42
TTC39BQ5VTQ0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TTC39BQ5VTQ0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TTC39BQ5VTQ0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TTC39BQ5VTQ0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 AP000347.1-202ENST00000435868 847 ntBASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 PRSS29P-201ENST00000440800 595 ntBASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 AC108073.2-201ENST00000464002 357 ntBASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 AGGF1P2-201ENST00000426656 2106 ntBASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TTC39BQ5VTQ0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 AC116353.5-201ENST00000638148 1699 ntBASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 MRPL20P1-201ENST00000400819 433 ntBASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 AC027601.4-201ENST00000611259 610 ntBASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 FAM197Y3-203ENST00000618346 717 ntBASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC39BQ5VTQ0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 PI4KAP1-204ENST00000612579 1703 ntBASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 MIR574-201ENST00000385209 96 ntBASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 AC010654.1-201ENST00000615722 808 ntBASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms