Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.43■□□□□ 0.7
USH1GQ495M9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
USH1GQ495M9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
USH1GQ495M9 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.43■□□□□ 0.7
USH1GQ495M9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.43■□□□□ 0.7
USH1GQ495M9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.43■□□□□ 0.7
USH1GQ495M9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.43■□□□□ 0.7
USH1GQ495M9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.43■□□□□ 0.7
USH1GQ495M9 AC099522.2-201ENST00000607001 744 ntBASIC19.43■□□□□ 0.7
USH1GQ495M9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.43■□□□□ 0.7
USH1GQ495M9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.43■□□□□ 0.7
USH1GQ495M9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.43■□□□□ 0.7
USH1GQ495M9 AL023806.1-201ENST00000603994 1649 ntBASIC19.43■□□□□ 0.7
USH1GQ495M9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.43■□□□□ 0.7
USH1GQ495M9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
USH1GQ495M9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USH1GQ495M9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
USH1GQ495M9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
USH1GQ495M9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.42■□□□□ 0.7
USH1GQ495M9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USH1GQ495M9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
USH1GQ495M9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USH1GQ495M9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USH1GQ495M9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USH1GQ495M9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USH1GQ495M9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USH1GQ495M9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USH1GQ495M9 AC002056.1-201ENST00000395613 760 ntBASIC19.42■□□□□ 0.7
USH1GQ495M9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USH1GQ495M9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.42■□□□□ 0.7
USH1GQ495M9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.42■□□□□ 0.7
USH1GQ495M9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
USH1GQ495M9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
USH1GQ495M9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
USH1GQ495M9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USH1GQ495M9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
USH1GQ495M9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.42■□□□□ 0.7
USH1GQ495M9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.42■□□□□ 0.7
USH1GQ495M9 AL021920.2-201ENST00000624828 1351 ntBASIC19.42■□□□□ 0.7
USH1GQ495M9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USH1GQ495M9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USH1GQ495M9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USH1GQ495M9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.41■□□□□ 0.7
USH1GQ495M9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.41■□□□□ 0.7
USH1GQ495M9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.41■□□□□ 0.7
USH1GQ495M9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.41■□□□□ 0.7
USH1GQ495M9 PMS2P2-201ENST00000425039 1128 ntBASIC19.41■□□□□ 0.7
USH1GQ495M9 METTL21AP1-201ENST00000438852 635 ntBASIC19.41■□□□□ 0.7
USH1GQ495M9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
USH1GQ495M9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.41■□□□□ 0.7
USH1GQ495M9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.41■□□□□ 0.7
USH1GQ495M9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
USH1GQ495M9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.41■□□□□ 0.7
USH1GQ495M9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.41■□□□□ 0.7
USH1GQ495M9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.41■□□□□ 0.7
USH1GQ495M9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.41■□□□□ 0.7
USH1GQ495M9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.41■□□□□ 0.7
USH1GQ495M9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.41■□□□□ 0.7
USH1GQ495M9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 KRT8P49-201ENST00000604166 1432 ntBASIC19.41■□□□□ 0.7
USH1GQ495M9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.41■□□□□ 0.7
USH1GQ495M9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USH1GQ495M9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.41■□□□□ 0.7
USH1GQ495M9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USH1GQ495M9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USH1GQ495M9 AC131009.4-201ENST00000624048 1740 ntBASIC19.4■□□□□ 0.7
USH1GQ495M9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USH1GQ495M9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.4■□□□□ 0.7
USH1GQ495M9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.4■□□□□ 0.7
USH1GQ495M9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.4■□□□□ 0.7
USH1GQ495M9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms