Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
RFX4Q33E94 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 AC092364.2-201ENST00000596710 2692 ntBASIC15.84■□□□□ 0.13
RFX4Q33E94 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RFX4Q33E94 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RFX4Q33E94 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX4Q33E94 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RFX4Q33E94 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.84■□□□□ 0.13
RFX4Q33E94 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX4Q33E94 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RFX4Q33E94 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.13
RFX4Q33E94 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
RFX4Q33E94 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFX4Q33E94 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.83■□□□□ 0.13
RFX4Q33E94 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.83■□□□□ 0.12
RFX4Q33E94 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 AL391256.1-201ENST00000443260 1855 ntBASIC15.83■□□□□ 0.12
RFX4Q33E94 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RFX4Q33E94 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.83■□□□□ 0.12
RFX4Q33E94 RNF152P1-201ENST00000397754 604 ntBASIC15.83■□□□□ 0.12
RFX4Q33E94 KRT18P38-201ENST00000449496 1282 ntBASIC15.83■□□□□ 0.12
RFX4Q33E94 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.83■□□□□ 0.12
RFX4Q33E94 AL390719.2-201ENST00000606993 987 ntBASIC15.83■□□□□ 0.12
RFX4Q33E94 AC073912.3-201ENST00000624414 853 ntBASIC15.83■□□□□ 0.12
RFX4Q33E94 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.83■□□□□ 0.12
RFX4Q33E94 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.83■□□□□ 0.12
RFX4Q33E94 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RFX4Q33E94 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RFX4Q33E94 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.83■□□□□ 0.12
RFX4Q33E94 AC024909.3-201ENST00000611513 2257 ntBASIC15.83■□□□□ 0.12
RFX4Q33E94 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 FRMD8P1-201ENST00000440433 1524 ntBASIC15.83■□□□□ 0.12
RFX4Q33E94 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX4Q33E94 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.82■□□□□ 0.12
RFX4Q33E94 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RFX4Q33E94 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.82■□□□□ 0.12
RFX4Q33E94 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.82■□□□□ 0.12
RFX4Q33E94 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.82■□□□□ 0.12
RFX4Q33E94 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RFX4Q33E94 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
RFX4Q33E94 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.82■□□□□ 0.12
RFX4Q33E94 AC112907.2-201ENST00000448639 330 ntBASIC15.82■□□□□ 0.12
RFX4Q33E94 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.82■□□□□ 0.12
RFX4Q33E94 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.82■□□□□ 0.12
RFX4Q33E94 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.82■□□□□ 0.12
RFX4Q33E94 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.82■□□□□ 0.12
RFX4Q33E94 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.82■□□□□ 0.12
RFX4Q33E94 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 AC010460.3-201ENST00000511359 1579 ntBASIC15.82■□□□□ 0.12
RFX4Q33E94 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFX4Q33E94 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.82■□□□□ 0.12
RFX4Q33E94 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms