Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-BQ31612 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-BQ31612 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-BQ31612 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-BQ31612 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-BQ31612 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-BQ31612 LINC00896-202ENST00000609602 2128 ntBASIC16.34■□□□□ 0.21
HLA-BQ31612 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HLA-BQ31612 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-BQ31612 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-BQ31612 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-BQ31612 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-BQ31612 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-BQ31612 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-BQ31612 SLC25A6P5-201ENST00000435663 894 ntBASIC16.34■□□□□ 0.21
HLA-BQ31612 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-BQ31612 HLA-V-204ENST00000476601 1289 ntBASIC16.34■□□□□ 0.21
HLA-BQ31612 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.34■□□□□ 0.21
HLA-BQ31612 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.34■□□□□ 0.21
HLA-BQ31612 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-BQ31612 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-BQ31612 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-BQ31612 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
HLA-BQ31612 AC073389.1-201ENST00000595595 795 ntBASIC16.34■□□□□ 0.21
HLA-BQ31612 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-BQ31612 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-BQ31612 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-BQ31612 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-BQ31612 AL021920.2-201ENST00000624828 1351 ntBASIC16.34■□□□□ 0.21
HLA-BQ31612 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-BQ31612 KRT8P49-201ENST00000604166 1432 ntBASIC16.34■□□□□ 0.21
HLA-BQ31612 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-BQ31612 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-BQ31612 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HLA-BQ31612 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-BQ31612 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-BQ31612 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-BQ31612 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.33■□□□□ 0.21
HLA-BQ31612 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.33■□□□□ 0.21
HLA-BQ31612 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-BQ31612 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
HLA-BQ31612 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-BQ31612 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-BQ31612 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HLA-BQ31612 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-BQ31612 COX5BP8-201ENST00000416911 349 ntBASIC16.33■□□□□ 0.2
HLA-BQ31612 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-BQ31612 SPTLC1P1-201ENST00000447199 261 ntBASIC16.33■□□□□ 0.2
HLA-BQ31612 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-BQ31612 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-BQ31612 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-BQ31612 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-BQ31612 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HLA-BQ31612 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-BQ31612 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
HLA-BQ31612 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-BQ31612 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-BQ31612 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-BQ31612 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
HLA-BQ31612 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
HLA-BQ31612 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-BQ31612 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-BQ31612 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-BQ31612 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HLA-BQ31612 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-BQ31612 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-BQ31612 AC007274.1-201ENST00000439805 662 ntBASIC16.32■□□□□ 0.2
HLA-BQ31612 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-BQ31612 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-BQ31612 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-BQ31612 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-BQ31612 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-BQ31612 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-BQ31612 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-BQ31612 AL359881.2-201ENST00000602973 570 ntBASIC16.32■□□□□ 0.2
HLA-BQ31612 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-BQ31612 LINC00895-201ENST00000629028 1637 ntBASIC16.32■□□□□ 0.2
HLA-BQ31612 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-BQ31612 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-BQ31612 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-BQ31612 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-BQ31612 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-BQ31612 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-BQ31612 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-BQ31612 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-BQ31612 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms