Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP2B3Q16720 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
ATP2B3Q16720 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP2B3Q16720 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
ATP2B3Q16720 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.74■□□□□ 0.91
ATP2B3Q16720 AC124947.2-201ENST00000547118 1133 ntBASIC20.74■□□□□ 0.91
ATP2B3Q16720 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP2B3Q16720 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B3Q16720 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B3Q16720 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B3Q16720 AL021920.2-201ENST00000624828 1351 ntBASIC20.73■□□□□ 0.91
ATP2B3Q16720 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B3Q16720 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 KRT8P49-201ENST00000604166 1432 ntBASIC20.73■□□□□ 0.91
ATP2B3Q16720 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B3Q16720 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B3Q16720 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B3Q16720 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B3Q16720 AC254562.1-201ENST00000417586 456 ntBASIC20.73■□□□□ 0.91
ATP2B3Q16720 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B3Q16720 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B3Q16720 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP2B3Q16720 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B3Q16720 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 AL023806.1-201ENST00000603994 1649 ntBASIC20.72■□□□□ 0.91
ATP2B3Q16720 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 AC002056.1-201ENST00000395613 760 ntBASIC20.72■□□□□ 0.91
ATP2B3Q16720 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 HCG4-201ENST00000418983 998 ntBASIC20.72■□□□□ 0.91
ATP2B3Q16720 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 SNHG9-202ENST00000564014 471 ntBASIC20.72■□□□□ 0.91
ATP2B3Q16720 AC099522.2-201ENST00000607001 744 ntBASIC20.72■□□□□ 0.91
ATP2B3Q16720 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 AC046158.3-201ENST00000624947 2558 ntBASIC20.72■□□□□ 0.91
ATP2B3Q16720 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B3Q16720 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP2B3Q16720 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.72■□□□□ 0.91
ATP2B3Q16720 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2B3Q16720 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP2B3Q16720 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2B3Q16720 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2B3Q16720 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.71■□□□□ 0.91
ATP2B3Q16720 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2B3Q16720 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ATP2B3Q16720 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2B3Q16720 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2B3Q16720 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2B3Q16720 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2B3Q16720 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2B3Q16720 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms