Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.07□□□□□ -0.32
HIST1H1AQ02539 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H1AQ02539 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
HIST1H1AQ02539 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
HIST1H1AQ02539 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H1AQ02539 AC023824.1-201ENST00000562945 2975 ntBASIC13.07□□□□□ -0.32
HIST1H1AQ02539 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H1AQ02539 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H1AQ02539 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.07□□□□□ -0.32
HIST1H1AQ02539 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
HIST1H1AQ02539 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HIST1H1AQ02539 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H1AQ02539 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H1AQ02539 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 KRT8P26-201ENST00000534154 1276 ntBASIC13.06□□□□□ -0.32
HIST1H1AQ02539 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 AL136038.3-201ENST00000561909 1096 ntBASIC13.06□□□□□ -0.32
HIST1H1AQ02539 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
HIST1H1AQ02539 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.05□□□□□ -0.32
HIST1H1AQ02539 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 BX276092.5-203ENST00000456199 560 ntBASIC13.05□□□□□ -0.32
HIST1H1AQ02539 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 AL049597.2-201ENST00000565575 961 ntBASIC13.05□□□□□ -0.32
HIST1H1AQ02539 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms