Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.2■□□□□ 0.5
SMAD3P84022 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.2■□□□□ 0.5
SMAD3P84022 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.2■□□□□ 0.5
SMAD3P84022 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.2■□□□□ 0.5
SMAD3P84022 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.2■□□□□ 0.5
SMAD3P84022 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.2■□□□□ 0.5
SMAD3P84022 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.2■□□□□ 0.5
SMAD3P84022 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.2■□□□□ 0.5
SMAD3P84022 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.2■□□□□ 0.5
SMAD3P84022 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.2■□□□□ 0.5
SMAD3P84022 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.2■□□□□ 0.5
SMAD3P84022 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.2■□□□□ 0.5
SMAD3P84022 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.2■□□□□ 0.5
SMAD3P84022 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.2■□□□□ 0.5
SMAD3P84022 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD3P84022 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.2■□□□□ 0.5
SMAD3P84022 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD3P84022 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD3P84022 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD3P84022 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.2■□□□□ 0.5
SMAD3P84022 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD3P84022 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD3P84022 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.2■□□□□ 0.5
SMAD3P84022 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.2■□□□□ 0.5
SMAD3P84022 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.19■□□□□ 0.5
SMAD3P84022 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SMAD3P84022 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SMAD3P84022 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.19■□□□□ 0.5
SMAD3P84022 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SMAD3P84022 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMAD3P84022 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.19■□□□□ 0.5
SMAD3P84022 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SMAD3P84022 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.19■□□□□ 0.5
SMAD3P84022 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.19■□□□□ 0.5
SMAD3P84022 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SMAD3P84022 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SMAD3P84022 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SMAD3P84022 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.19■□□□□ 0.5
SMAD3P84022 SPTSSB-204ENST00000617024 1292 ntBASIC18.19■□□□□ 0.5
SMAD3P84022 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.19■□□□□ 0.5
SMAD3P84022 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.19■□□□□ 0.5
SMAD3P84022 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.19■□□□□ 0.5
SMAD3P84022 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.19■□□□□ 0.5
SMAD3P84022 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
SMAD3P84022 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.19■□□□□ 0.5
SMAD3P84022 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.19■□□□□ 0.5
SMAD3P84022 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
SMAD3P84022 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD3P84022 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.18■□□□□ 0.5
SMAD3P84022 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.18■□□□□ 0.5
SMAD3P84022 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SMAD3P84022 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SMAD3P84022 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD3P84022 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SMAD3P84022 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD3P84022 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 FAM86MP-201ENST00000340703 885 ntBASIC18.18■□□□□ 0.5
SMAD3P84022 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SMAD3P84022 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD3P84022 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SMAD3P84022 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.18■□□□□ 0.5
SMAD3P84022 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD3P84022 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SMAD3P84022 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.18■□□□□ 0.5
SMAD3P84022 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD3P84022 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.18■□□□□ 0.5
SMAD3P84022 AC099568.2-201ENST00000609194 695 ntBASIC18.18■□□□□ 0.5
SMAD3P84022 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SMAD3P84022 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
SMAD3P84022 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD3P84022 AC046185.3-201ENST00000623228 1824 ntBASIC18.18■□□□□ 0.5
SMAD3P84022 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms