Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
CCL20P78556 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.4□□□□□ -0.27
CCL20P78556 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CCL20P78556 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.4□□□□□ -0.27
CCL20P78556 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
CCL20P78556 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CCL20P78556 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CCL20P78556 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CCL20P78556 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL20P78556 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCL20P78556 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.39□□□□□ -0.27
CCL20P78556 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CCL20P78556 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 AC112698.1-201ENST00000510299 916 ntBASIC13.39□□□□□ -0.27
CCL20P78556 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.39□□□□□ -0.27
CCL20P78556 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.39□□□□□ -0.27
CCL20P78556 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.39□□□□□ -0.27
CCL20P78556 AC133041.1-202ENST00000642053 222 ntBASIC13.39□□□□□ -0.27
CCL20P78556 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL20P78556 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CCL20P78556 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL20P78556 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CCL20P78556 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.39□□□□□ -0.27
CCL20P78556 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL20P78556 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CCL20P78556 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL20P78556 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CCL20P78556 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CCL20P78556 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL20P78556 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL20P78556 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.38□□□□□ -0.27
CCL20P78556 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.38□□□□□ -0.27
CCL20P78556 AC069152.1-201ENST00000438030 544 ntBASIC13.38□□□□□ -0.27
CCL20P78556 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL20P78556 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.38□□□□□ -0.27
CCL20P78556 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.38□□□□□ -0.27
CCL20P78556 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
CCL20P78556 IKBKGP1-201ENST00000612193 1073 ntBASIC13.38□□□□□ -0.27
CCL20P78556 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CCL20P78556 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 NORAD-201ENST00000565493 5339 ntBASIC13.38□□□□□ -0.27
CCL20P78556 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL20P78556 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CCL20P78556 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
CCL20P78556 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL20P78556 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL20P78556 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL20P78556 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL20P78556 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CCL20P78556 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL20P78556 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CCL20P78556 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL20P78556 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CCL20P78556 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CCL20P78556 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL20P78556 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL20P78556 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL20P78556 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CCL20P78556 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms