Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB38P57729 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 AC105020.1-201ENST00000435356 2205 ntBASIC15.93■□□□□ 0.14
RAB38P57729 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB38P57729 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
RAB38P57729 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RAB38P57729 MIR574-201ENST00000385209 96 ntBASIC15.93■□□□□ 0.14
RAB38P57729 AP000347.1-202ENST00000435868 847 ntBASIC15.93■□□□□ 0.14
RAB38P57729 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB38P57729 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.93■□□□□ 0.14
RAB38P57729 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.93■□□□□ 0.14
RAB38P57729 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB38P57729 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.93■□□□□ 0.14
RAB38P57729 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.93■□□□□ 0.14
RAB38P57729 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB38P57729 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RAB38P57729 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB38P57729 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB38P57729 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.93■□□□□ 0.14
RAB38P57729 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB38P57729 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB38P57729 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB38P57729 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB38P57729 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB38P57729 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB38P57729 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB38P57729 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RAB38P57729 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RAB38P57729 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB38P57729 HCG4-201ENST00000418983 998 ntBASIC15.92■□□□□ 0.14
RAB38P57729 PMS2P1-201ENST00000431037 1228 ntBASIC15.92■□□□□ 0.14
RAB38P57729 RHOQP3-201ENST00000437982 621 ntBASIC15.92■□□□□ 0.14
RAB38P57729 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RAB38P57729 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.92■□□□□ 0.14
RAB38P57729 AC007064.4-201ENST00000637740 555 ntBASIC15.92■□□□□ 0.14
RAB38P57729 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB38P57729 LINC00895-201ENST00000629028 1637 ntBASIC15.92■□□□□ 0.14
RAB38P57729 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB38P57729 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB38P57729 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RAB38P57729 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
RAB38P57729 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RAB38P57729 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB38P57729 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB38P57729 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB38P57729 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB38P57729 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB38P57729 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB38P57729 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 AC131009.4-201ENST00000624048 1740 ntBASIC15.91■□□□□ 0.14
RAB38P57729 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RAB38P57729 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.91■□□□□ 0.14
RAB38P57729 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
RAB38P57729 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
RAB38P57729 KRT18P2-201ENST00000447938 1258 ntBASIC15.91■□□□□ 0.14
RAB38P57729 AL513480.1-201ENST00000451731 511 ntBASIC15.91■□□□□ 0.14
RAB38P57729 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
RAB38P57729 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB38P57729 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB38P57729 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
RAB38P57729 AC018845.2-201ENST00000568326 409 ntBASIC15.91■□□□□ 0.14
RAB38P57729 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 AC013467.2-201ENST00000605472 835 ntBASIC15.91■□□□□ 0.14
RAB38P57729 AP001350.2-201ENST00000625104 1094 ntBASIC15.91■□□□□ 0.14
RAB38P57729 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB38P57729 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB38P57729 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.91■□□□□ 0.14
RAB38P57729 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms