Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLCN4P51793 EGFEM1P-202ENST00000431685 1563 ntBASIC17.78■□□□□ 0.44
CLCN4P51793 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLCN4P51793 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLCN4P51793 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.77■□□□□ 0.44
CLCN4P51793 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.77■□□□□ 0.44
CLCN4P51793 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CLCN4P51793 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.77■□□□□ 0.44
CLCN4P51793 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.77■□□□□ 0.44
CLCN4P51793 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.77■□□□□ 0.44
CLCN4P51793 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CLCN4P51793 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 AC069120.2-201ENST00000524091 540 ntBASIC17.77■□□□□ 0.44
CLCN4P51793 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.77■□□□□ 0.44
CLCN4P51793 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.77■□□□□ 0.44
CLCN4P51793 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.77■□□□□ 0.44
CLCN4P51793 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN4P51793 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.77■□□□□ 0.44
CLCN4P51793 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLCN4P51793 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CLCN4P51793 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCN4P51793 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCN4P51793 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLCN4P51793 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN4P51793 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLCN4P51793 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLCN4P51793 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.76■□□□□ 0.43
CLCN4P51793 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN4P51793 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.76■□□□□ 0.43
CLCN4P51793 AC005034.1-201ENST00000426657 489 ntBASIC17.76■□□□□ 0.43
CLCN4P51793 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
CLCN4P51793 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
CLCN4P51793 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLCN4P51793 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CLCN4P51793 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CLCN4P51793 LINC02560-201ENST00000596379 459 ntBASIC17.76■□□□□ 0.43
CLCN4P51793 AL035252.4-201ENST00000624174 288 ntBASIC17.76■□□□□ 0.43
CLCN4P51793 AC008761.3-201ENST00000624803 892 ntBASIC17.76■□□□□ 0.43
CLCN4P51793 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.76■□□□□ 0.43
CLCN4P51793 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CLCN4P51793 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLCN4P51793 PCDHB18P-201ENST00000524813 2368 ntBASIC17.76■□□□□ 0.43
CLCN4P51793 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLCN4P51793 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CLCN4P51793 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN4P51793 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CLCN4P51793 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CLCN4P51793 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CLCN4P51793 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.75■□□□□ 0.43
CLCN4P51793 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.75■□□□□ 0.43
CLCN4P51793 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN4P51793 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms