Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SSR4P51571 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.53■□□□□ 0.08
SSR4P51571 AC087641.1-201ENST00000557561 1021 ntBASIC15.53■□□□□ 0.08
SSR4P51571 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.53■□□□□ 0.08
SSR4P51571 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SSR4P51571 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SSR4P51571 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SSR4P51571 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SSR4P51571 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SSR4P51571 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SSR4P51571 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.53■□□□□ 0.08
SSR4P51571 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.53■□□□□ 0.08
SSR4P51571 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SSR4P51571 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSR4P51571 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.53■□□□□ 0.08
SSR4P51571 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSR4P51571 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSR4P51571 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSR4P51571 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.53■□□□□ 0.08
SSR4P51571 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSR4P51571 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSR4P51571 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSR4P51571 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.52■□□□□ 0.08
SSR4P51571 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SSR4P51571 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SSR4P51571 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.52■□□□□ 0.08
SSR4P51571 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.52■□□□□ 0.08
SSR4P51571 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 HMGA1P7-201ENST00000406908 502 ntBASIC15.52■□□□□ 0.08
SSR4P51571 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.52■□□□□ 0.08
SSR4P51571 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.52■□□□□ 0.08
SSR4P51571 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.52■□□□□ 0.08
SSR4P51571 DNAJB3-202ENST00000449667 1266 ntBASIC15.52■□□□□ 0.08
SSR4P51571 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.52■□□□□ 0.08
SSR4P51571 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SSR4P51571 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.52■□□□□ 0.08
SSR4P51571 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.52■□□□□ 0.08
SSR4P51571 SNHG9-202ENST00000564014 471 ntBASIC15.52■□□□□ 0.08
SSR4P51571 MPDU1-223ENST00000582151 728 ntBASIC15.52■□□□□ 0.08
SSR4P51571 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.52■□□□□ 0.08
SSR4P51571 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SSR4P51571 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.52■□□□□ 0.08
SSR4P51571 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.52■□□□□ 0.08
SSR4P51571 AP001160.2-201ENST00000596071 487 ntBASIC15.52■□□□□ 0.08
SSR4P51571 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
SSR4P51571 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.52■□□□□ 0.08
SSR4P51571 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSR4P51571 AC092902.6-201ENST00000641783 218 ntBASIC15.52■□□□□ 0.08
SSR4P51571 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SSR4P51571 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.52■□□□□ 0.08
SSR4P51571 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.52■□□□□ 0.07
SSR4P51571 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SSR4P51571 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SSR4P51571 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SSR4P51571 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SSR4P51571 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.52■□□□□ 0.07
SSR4P51571 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SSR4P51571 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.52■□□□□ 0.07
SSR4P51571 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SSR4P51571 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SSR4P51571 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SSR4P51571 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSR4P51571 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.51■□□□□ 0.07
SSR4P51571 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSR4P51571 AC131009.4-201ENST00000624048 1740 ntBASIC15.51■□□□□ 0.07
SSR4P51571 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SSR4P51571 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSR4P51571 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SSR4P51571 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSR4P51571 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SSR4P51571 AC092053.1-201ENST00000605787 1936 ntBASIC15.51■□□□□ 0.07
SSR4P51571 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSR4P51571 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSR4P51571 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.51■□□□□ 0.07
SSR4P51571 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSR4P51571 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SSR4P51571 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
SSR4P51571 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.51■□□□□ 0.07
SSR4P51571 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SSR4P51571 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.51■□□□□ 0.07
SSR4P51571 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.51■□□□□ 0.07
SSR4P51571 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SSR4P51571 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.51■□□□□ 0.07
SSR4P51571 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.51■□□□□ 0.07
SSR4P51571 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.51■□□□□ 0.07
SSR4P51571 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSR4P51571 AL596442.2-201ENST00000610240 980 ntBASIC15.51■□□□□ 0.07
SSR4P51571 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms