Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
UBE2AP49459 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2AP49459 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 AC007967.3-201ENST00000434308 558 ntBASIC10.82□□□□□ -0.68
UBE2AP49459 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC10.82□□□□□ -0.68
UBE2AP49459 AC009533.2-201ENST00000543664 586 ntBASIC10.82□□□□□ -0.68
UBE2AP49459 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC10.82□□□□□ -0.68
UBE2AP49459 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
UBE2AP49459 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
UBE2AP49459 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
UBE2AP49459 Z69720.1-201ENST00000601483 472 ntBASIC10.82□□□□□ -0.68
UBE2AP49459 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
UBE2AP49459 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
UBE2AP49459 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
UBE2AP49459 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC10.82□□□□□ -0.68
UBE2AP49459 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 AC084018.2-201ENST00000613093 2607 ntBASIC10.82□□□□□ -0.68
UBE2AP49459 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2AP49459 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2AP49459 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2AP49459 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
UBE2AP49459 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
UBE2AP49459 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
UBE2AP49459 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2AP49459 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2AP49459 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2AP49459 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
UBE2AP49459 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 GUK1-204ENST00000366721 689 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2AP49459 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 AC246785.2-201ENST00000432512 513 ntBASIC10.81□□□□□ -0.68
UBE2AP49459 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 NKTR-203ENST00000442970 646 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2AP49459 DANCR-204ENST00000444958 709 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2AP49459 FAM210CP-201ENST00000445714 574 ntBASIC10.81□□□□□ -0.68
UBE2AP49459 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2AP49459 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 COX5A-202ENST00000562233 441 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2AP49459 COX5A-204ENST00000567270 579 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2AP49459 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
UBE2AP49459 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
UBE2AP49459 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
UBE2AP49459 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2AP49459 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
UBE2AP49459 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
UBE2AP49459 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
UBE2AP49459 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms