Protein–RNA interactions for Protein: P49221

TGM4, Protein-glutamine gamma-glutamyltransferase 4, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGM4P49221 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.3■□□□□ 0.04
TGM4P49221 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.3■□□□□ 0.04
TGM4P49221 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.3■□□□□ 0.04
TGM4P49221 AP002414.2-201ENST00000591780 3365 ntBASIC15.3■□□□□ 0.04
TGM4P49221 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
TGM4P49221 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TGM4P49221 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TGM4P49221 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TGM4P49221 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TGM4P49221 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TGM4P49221 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TGM4P49221 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.29■□□□□ 0.04
TGM4P49221 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.29■□□□□ 0.04
TGM4P49221 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TGM4P49221 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.29■□□□□ 0.04
TGM4P49221 AC010460.3-201ENST00000511359 1579 ntBASIC15.29■□□□□ 0.04
TGM4P49221 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.29■□□□□ 0.04
TGM4P49221 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.29■□□□□ 0.04
TGM4P49221 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.29■□□□□ 0.04
TGM4P49221 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.29■□□□□ 0.04
TGM4P49221 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.29■□□□□ 0.04
TGM4P49221 AL359075.1-203ENST00000462729 1002 ntBASIC15.29■□□□□ 0.04
TGM4P49221 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 GPR32P1-201ENST00000601788 811 ntBASIC15.29■□□□□ 0.04
TGM4P49221 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.29■□□□□ 0.04
TGM4P49221 HYMAI.1-201ENST00000620949 238 ntBASIC15.29■□□□□ 0.04
TGM4P49221 AL590326.2-201ENST00000625139 305 ntBASIC15.29■□□□□ 0.04
TGM4P49221 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 AL365203.3-201ENST00000609742 2057 ntBASIC15.29■□□□□ 0.04
TGM4P49221 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
TGM4P49221 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TGM4P49221 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.29■□□□□ 0.04
TGM4P49221 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TGM4P49221 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TGM4P49221 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.28■□□□□ 0.04
TGM4P49221 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.28■□□□□ 0.04
TGM4P49221 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.28■□□□□ 0.04
TGM4P49221 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.28■□□□□ 0.04
TGM4P49221 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TGM4P49221 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TGM4P49221 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.28■□□□□ 0.04
TGM4P49221 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TGM4P49221 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TGM4P49221 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TGM4P49221 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.28■□□□□ 0.04
TGM4P49221 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.28■□□□□ 0.04
TGM4P49221 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.28■□□□□ 0.04
TGM4P49221 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.28■□□□□ 0.04
TGM4P49221 AC019129.2-201ENST00000609837 1235 ntBASIC15.28■□□□□ 0.04
TGM4P49221 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.28■□□□□ 0.04
TGM4P49221 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.28■□□□□ 0.04
TGM4P49221 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.28■□□□□ 0.04
TGM4P49221 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.28■□□□□ 0.04
TGM4P49221 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TGM4P49221 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TGM4P49221 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TGM4P49221 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.27■□□□□ 0.04
TGM4P49221 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.27■□□□□ 0.04
TGM4P49221 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TGM4P49221 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TGM4P49221 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.27■□□□□ 0.04
TGM4P49221 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.27■□□□□ 0.04
TGM4P49221 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.27■□□□□ 0.04
TGM4P49221 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.27■□□□□ 0.04
TGM4P49221 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TGM4P49221 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms