Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
NEDD4P46934 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.93■□□□□ 0.78
NEDD4P46934 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.93■□□□□ 0.78
NEDD4P46934 PDPK2P-202ENST00000562415 1191 ntBASIC19.93■□□□□ 0.78
NEDD4P46934 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.93■□□□□ 0.78
NEDD4P46934 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.93■□□□□ 0.78
NEDD4P46934 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.93■□□□□ 0.78
NEDD4P46934 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.93■□□□□ 0.78
NEDD4P46934 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD4P46934 AC092919.2-201ENST00000623631 1645 ntBASIC19.92■□□□□ 0.78
NEDD4P46934 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD4P46934 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD4P46934 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.92■□□□□ 0.78
NEDD4P46934 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
NEDD4P46934 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NEDD4P46934 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD4P46934 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.92■□□□□ 0.78
NEDD4P46934 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD4P46934 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD4P46934 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD4P46934 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
NEDD4P46934 AC023141.13-201ENST00000604991 943 ntBASIC19.92■□□□□ 0.78
NEDD4P46934 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.92■□□□□ 0.78
NEDD4P46934 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD4P46934 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.92■□□□□ 0.78
NEDD4P46934 LINC00895-201ENST00000629028 1637 ntBASIC19.92■□□□□ 0.78
NEDD4P46934 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD4P46934 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD4P46934 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NEDD4P46934 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.92■□□□□ 0.78
NEDD4P46934 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD4P46934 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.92■□□□□ 0.78
NEDD4P46934 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD4P46934 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD4P46934 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.91■□□□□ 0.78
NEDD4P46934 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NEDD4P46934 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD4P46934 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD4P46934 AGGF1P2-201ENST00000426656 2106 ntBASIC19.91■□□□□ 0.78
NEDD4P46934 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD4P46934 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD4P46934 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD4P46934 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.91■□□□□ 0.78
NEDD4P46934 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
NEDD4P46934 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NEDD4P46934 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.91■□□□□ 0.78
NEDD4P46934 AC040169.1-201ENST00000565382 521 ntBASIC19.91■□□□□ 0.78
NEDD4P46934 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
NEDD4P46934 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
NEDD4P46934 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD4P46934 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD4P46934 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
NEDD4P46934 SNX33P1-201ENST00000592116 1762 ntBASIC19.91■□□□□ 0.78
NEDD4P46934 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NEDD4P46934 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
NEDD4P46934 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.9■□□□□ 0.78
NEDD4P46934 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NEDD4P46934 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 AC006277.1-201ENST00000624348 1610 ntBASIC19.9■□□□□ 0.78
NEDD4P46934 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.9■□□□□ 0.78
NEDD4P46934 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.9■□□□□ 0.78
NEDD4P46934 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
NEDD4P46934 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 HMGA1P7-201ENST00000406908 502 ntBASIC19.9■□□□□ 0.78
NEDD4P46934 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.9■□□□□ 0.78
NEDD4P46934 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.9■□□□□ 0.78
NEDD4P46934 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.9■□□□□ 0.78
NEDD4P46934 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.9■□□□□ 0.78
NEDD4P46934 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
NEDD4P46934 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.9■□□□□ 0.78
NEDD4P46934 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NEDD4P46934 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.9■□□□□ 0.78
NEDD4P46934 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
NEDD4P46934 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.9■□□□□ 0.78
NEDD4P46934 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.9■□□□□ 0.78
NEDD4P46934 AL603756.1-201ENST00000606511 2163 ntBASIC19.9■□□□□ 0.78
NEDD4P46934 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD4P46934 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.9■□□□□ 0.78
NEDD4P46934 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms