Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NKX2-1P43699 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX2-1P43699 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 AC097374.2-201ENST00000618617 1306 ntBASIC13.95□□□□□ -0.18
NKX2-1P43699 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NKX2-1P43699 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
NKX2-1P43699 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NKX2-1P43699 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX2-1P43699 INGX-201ENST00000359239 846 ntBASIC13.95□□□□□ -0.18
NKX2-1P43699 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX2-1P43699 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.95□□□□□ -0.18
NKX2-1P43699 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.95□□□□□ -0.18
NKX2-1P43699 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.95□□□□□ -0.18
NKX2-1P43699 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NKX2-1P43699 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX2-1P43699 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX2-1P43699 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX2-1P43699 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NKX2-1P43699 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX2-1P43699 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX2-1P43699 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX2-1P43699 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NKX2-1P43699 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX2-1P43699 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NKX2-1P43699 FRMD8P1-201ENST00000440433 1524 ntBASIC13.95□□□□□ -0.18
NKX2-1P43699 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
NKX2-1P43699 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX2-1P43699 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-1P43699 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.94□□□□□ -0.18
NKX2-1P43699 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NKX2-1P43699 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX2-1P43699 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.94□□□□□ -0.18
NKX2-1P43699 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.94□□□□□ -0.18
NKX2-1P43699 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 AC010460.3-201ENST00000511359 1579 ntBASIC13.94□□□□□ -0.18
NKX2-1P43699 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.94□□□□□ -0.18
NKX2-1P43699 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.94□□□□□ -0.18
NKX2-1P43699 AL136038.4-201ENST00000603606 1261 ntBASIC13.94□□□□□ -0.18
NKX2-1P43699 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.94□□□□□ -0.18
NKX2-1P43699 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX2-1P43699 MTHFR-217ENST00000641820 1569 ntBASIC13.94□□□□□ -0.18
NKX2-1P43699 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NKX2-1P43699 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
NKX2-1P43699 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NKX2-1P43699 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 AL391807.1-203ENST00000604392 2365 ntBASIC13.94□□□□□ -0.18
NKX2-1P43699 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.94□□□□□ -0.18
NKX2-1P43699 ALOX12P2-203ENST00000570921 1945 ntBASIC13.94□□□□□ -0.18
NKX2-1P43699 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-1P43699 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.94□□□□□ -0.18
NKX2-1P43699 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.93□□□□□ -0.18
NKX2-1P43699 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NKX2-1P43699 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NKX2-1P43699 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms