Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 TUBB8P12-201ENST00000308911 1335 ntBASIC13.88□□□□□ -0.19
CEACAM3P40198 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 TUBB7P-202ENST00000428444 1305 ntBASIC13.88□□□□□ -0.19
CEACAM3P40198 TUBB8P7-204ENST00000567960 1332 ntBASIC13.88□□□□□ -0.19
CEACAM3P40198 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 AC006504.4-201ENST00000592118 1568 ntBASIC13.88□□□□□ -0.19
CEACAM3P40198 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CEACAM3P40198 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CEACAM3P40198 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CEACAM3P40198 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CEACAM3P40198 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 PTCHD3P3-201ENST00000403073 906 ntBASIC13.87□□□□□ -0.19
CEACAM3P40198 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CEACAM3P40198 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.87□□□□□ -0.19
CEACAM3P40198 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.87□□□□□ -0.19
CEACAM3P40198 AC009078.2-202ENST00000463353 338 ntBASIC13.87□□□□□ -0.19
CEACAM3P40198 AC092910.1-201ENST00000482027 1129 ntBASIC13.87□□□□□ -0.19
CEACAM3P40198 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
CEACAM3P40198 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
CEACAM3P40198 AL121894.2-201ENST00000602977 491 ntBASIC13.87□□□□□ -0.19
CEACAM3P40198 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.87□□□□□ -0.19
CEACAM3P40198 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.87□□□□□ -0.19
CEACAM3P40198 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CEACAM3P40198 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.87□□□□□ -0.19
CEACAM3P40198 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CEACAM3P40198 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.86□□□□□ -0.19
CEACAM3P40198 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
CEACAM3P40198 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 AC243591.1-201ENST00000452967 1364 ntBASIC13.86□□□□□ -0.19
CEACAM3P40198 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CEACAM3P40198 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.86□□□□□ -0.19
CEACAM3P40198 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.86□□□□□ -0.19
CEACAM3P40198 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.86□□□□□ -0.19
CEACAM3P40198 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.86□□□□□ -0.19
CEACAM3P40198 AC009053.2-201ENST00000563701 2365 ntBASIC13.86□□□□□ -0.19
CEACAM3P40198 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.86□□□□□ -0.19
CEACAM3P40198 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 AC073621.1-201ENST00000392730 636 ntBASIC13.86□□□□□ -0.19
CEACAM3P40198 SLC25A1P3-201ENST00000395415 828 ntBASIC13.86□□□□□ -0.19
CEACAM3P40198 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.86□□□□□ -0.19
CEACAM3P40198 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.86□□□□□ -0.19
CEACAM3P40198 AC079776.4-201ENST00000511039 504 ntBASIC13.86□□□□□ -0.19
CEACAM3P40198 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.86□□□□□ -0.19
CEACAM3P40198 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.86□□□□□ -0.19
CEACAM3P40198 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.86□□□□□ -0.19
CEACAM3P40198 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.86□□□□□ -0.19
CEACAM3P40198 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CEACAM3P40198 AC008667.4-201ENST00000607370 168 ntBASIC13.86□□□□□ -0.19
CEACAM3P40198 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.86□□□□□ -0.19
CEACAM3P40198 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.86□□□□□ -0.19
CEACAM3P40198 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.86□□□□□ -0.19
CEACAM3P40198 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
CEACAM3P40198 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.86□□□□□ -0.19
CEACAM3P40198 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CEACAM3P40198 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 HLA-A-201ENST00000376802 1334 ntBASIC13.86□□□□□ -0.19
CEACAM3P40198 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.86□□□□□ -0.19
CEACAM3P40198 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 AL645608.8-201ENST00000606034 2086 ntBASIC13.86□□□□□ -0.19
CEACAM3P40198 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CEACAM3P40198 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CEACAM3P40198 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CEACAM3P40198 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CEACAM3P40198 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CEACAM3P40198 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.85□□□□□ -0.19
CEACAM3P40198 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.85□□□□□ -0.19
CEACAM3P40198 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.85□□□□□ -0.19
CEACAM3P40198 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CEACAM3P40198 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms