Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.66■□□□□ 0.26
TRIM23P36406 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM23P36406 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM23P36406 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM23P36406 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM23P36406 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM23P36406 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM23P36406 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
TRIM23P36406 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM23P36406 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRIM23P36406 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 AC092474.2-201ENST00000424288 719 ntBASIC16.65■□□□□ 0.26
TRIM23P36406 CNN2P11-201ENST00000429351 262 ntBASIC16.65■□□□□ 0.26
TRIM23P36406 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM23P36406 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM23P36406 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.65■□□□□ 0.26
TRIM23P36406 FAM86C2P-203ENST00000528684 1004 ntBASIC16.65■□□□□ 0.26
TRIM23P36406 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM23P36406 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM23P36406 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM23P36406 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM23P36406 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM23P36406 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM23P36406 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM23P36406 AP001350.2-201ENST00000625104 1094 ntBASIC16.65■□□□□ 0.26
TRIM23P36406 AL513210.1-201ENST00000629608 234 ntBASIC16.65■□□□□ 0.26
TRIM23P36406 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM23P36406 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRIM23P36406 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM23P36406 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM23P36406 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM23P36406 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM23P36406 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM23P36406 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM23P36406 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM23P36406 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
TRIM23P36406 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM23P36406 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.64■□□□□ 0.25
TRIM23P36406 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRIM23P36406 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 AL671277.1-201ENST00000429656 993 ntBASIC16.64■□□□□ 0.25
TRIM23P36406 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM23P36406 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TRIM23P36406 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM23P36406 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM23P36406 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM23P36406 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
TRIM23P36406 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRIM23P36406 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRIM23P36406 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM23P36406 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM23P36406 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM23P36406 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM23P36406 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM23P36406 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM23P36406 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM23P36406 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM23P36406 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM23P36406 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM23P36406 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM23P36406 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM23P36406 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM23P36406 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRIM23P36406 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM23P36406 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM23P36406 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM23P36406 RNU1-129P-201ENST00000384064 167 ntBASIC16.63■□□□□ 0.25
TRIM23P36406 PMS2P4-201ENST00000412466 1052 ntBASIC16.63■□□□□ 0.25
TRIM23P36406 AL355306.1-201ENST00000415580 579 ntBASIC16.63■□□□□ 0.25
TRIM23P36406 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM23P36406 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM23P36406 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms