Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGCLP35914 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HMGCLP35914 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCLP35914 AC078925.2-201ENST00000624013 1973 ntBASIC16.87■□□□□ 0.29
HMGCLP35914 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCLP35914 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCLP35914 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HMGCLP35914 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCLP35914 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGCLP35914 RNF216P1-203ENST00000404404 2427 ntBASIC16.87■□□□□ 0.29
HMGCLP35914 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCLP35914 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGCLP35914 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCLP35914 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCLP35914 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCLP35914 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HMGCLP35914 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.86■□□□□ 0.29
HMGCLP35914 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HMGCLP35914 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HMGCLP35914 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGCLP35914 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.86■□□□□ 0.29
HMGCLP35914 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 SLC22A20-204ENST00000530038 1673 ntBASIC16.86■□□□□ 0.29
HMGCLP35914 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HMGCLP35914 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
HMGCLP35914 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
HMGCLP35914 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HMGCLP35914 HCG4-201ENST00000418983 998 ntBASIC16.86■□□□□ 0.29
HMGCLP35914 RHOQP3-201ENST00000437982 621 ntBASIC16.86■□□□□ 0.29
HMGCLP35914 AL591424.1-201ENST00000442569 1213 ntBASIC16.86■□□□□ 0.29
HMGCLP35914 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HMGCLP35914 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.86■□□□□ 0.29
HMGCLP35914 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGCLP35914 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.86■□□□□ 0.29
HMGCLP35914 AC064836.3-201ENST00000607928 673 ntBASIC16.86■□□□□ 0.29
HMGCLP35914 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGCLP35914 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HMGCLP35914 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HMGCLP35914 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGCLP35914 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.86■□□□□ 0.29
HMGCLP35914 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCLP35914 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGCLP35914 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.85■□□□□ 0.29
HMGCLP35914 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
HMGCLP35914 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.85■□□□□ 0.29
HMGCLP35914 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
HMGCLP35914 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HMGCLP35914 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGCLP35914 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGCLP35914 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HMGCLP35914 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
HMGCLP35914 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 PMS2P1-201ENST00000431037 1228 ntBASIC16.85■□□□□ 0.29
HMGCLP35914 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGCLP35914 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HMGCLP35914 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HMGCLP35914 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGCLP35914 AL139011.1-202ENST00000642063 584 ntBASIC16.85■□□□□ 0.29
HMGCLP35914 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HMGCLP35914 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HMGCLP35914 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGCLP35914 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCLP35914 NKILA-202ENST00000614771 2598 ntBASIC16.84■□□□□ 0.29
HMGCLP35914 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCLP35914 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCLP35914 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms