Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RORAP35398 SLC25A1P3-201ENST00000395415 828 ntBASIC16.11■□□□□ 0.17
RORAP35398 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.11■□□□□ 0.17
RORAP35398 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.11■□□□□ 0.17
RORAP35398 CNN2P11-201ENST00000429351 262 ntBASIC16.11■□□□□ 0.17
RORAP35398 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RORAP35398 REXO1L3P-201ENST00000622202 1288 ntBASIC16.11■□□□□ 0.17
RORAP35398 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RORAP35398 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RORAP35398 AC092919.2-201ENST00000623631 1645 ntBASIC16.11■□□□□ 0.17
RORAP35398 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.11■□□□□ 0.17
RORAP35398 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RORAP35398 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RORAP35398 AC116353.5-201ENST00000638148 1699 ntBASIC16.11■□□□□ 0.17
RORAP35398 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.11■□□□□ 0.17
RORAP35398 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RORAP35398 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.11■□□□□ 0.17
RORAP35398 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.11■□□□□ 0.17
RORAP35398 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RORAP35398 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RORAP35398 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RORAP35398 CROCCP2-202ENST00000412962 2773 ntBASIC16.1■□□□□ 0.17
RORAP35398 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.1■□□□□ 0.17
RORAP35398 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RORAP35398 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RORAP35398 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RORAP35398 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RORAP35398 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.1■□□□□ 0.17
RORAP35398 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.1■□□□□ 0.17
RORAP35398 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.1■□□□□ 0.17
RORAP35398 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
RORAP35398 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.1■□□□□ 0.17
RORAP35398 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RORAP35398 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RORAP35398 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.1■□□□□ 0.17
RORAP35398 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
RORAP35398 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.1■□□□□ 0.17
RORAP35398 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RORAP35398 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.1■□□□□ 0.17
RORAP35398 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.1■□□□□ 0.17
RORAP35398 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
RORAP35398 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RORAP35398 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RORAP35398 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RORAP35398 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.09■□□□□ 0.17
RORAP35398 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RORAP35398 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.09■□□□□ 0.17
RORAP35398 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.09■□□□□ 0.17
RORAP35398 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 AL023806.1-201ENST00000603994 1649 ntBASIC16.09■□□□□ 0.17
RORAP35398 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.09■□□□□ 0.17
RORAP35398 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RORAP35398 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.09■□□□□ 0.17
RORAP35398 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.09■□□□□ 0.17
RORAP35398 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RORAP35398 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RORAP35398 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.09■□□□□ 0.17
RORAP35398 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.09■□□□□ 0.17
RORAP35398 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RORAP35398 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.09■□□□□ 0.17
RORAP35398 KRT18P28-201ENST00000453838 1332 ntBASIC16.09■□□□□ 0.17
RORAP35398 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RORAP35398 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RORAP35398 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.09■□□□□ 0.17
RORAP35398 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms