Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP11P24347 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
MMP11P24347 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP11P24347 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
MMP11P24347 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP11P24347 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP11P24347 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP11P24347 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP11P24347 AC092183.1-201ENST00000469884 875 ntBASIC16.12■□□□□ 0.17
MMP11P24347 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP11P24347 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP11P24347 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP11P24347 AC096734.2-201ENST00000562054 433 ntBASIC16.12■□□□□ 0.17
MMP11P24347 AC018845.2-201ENST00000568326 409 ntBASIC16.12■□□□□ 0.17
MMP11P24347 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
MMP11P24347 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP11P24347 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP11P24347 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP11P24347 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.12■□□□□ 0.17
MMP11P24347 AC079781.4-201ENST00000641908 219 ntBASIC16.12■□□□□ 0.17
MMP11P24347 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP11P24347 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP11P24347 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP11P24347 PKD1P1-201ENST00000458669 6805 ntBASIC16.12■□□□□ 0.17
MMP11P24347 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP11P24347 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP11P24347 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP11P24347 AL118508.1-201ENST00000613502 2345 ntBASIC16.12■□□□□ 0.17
MMP11P24347 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP11P24347 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP11P24347 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP11P24347 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP11P24347 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
MMP11P24347 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP11P24347 AC060834.1-201ENST00000443027 2032 ntBASIC16.11■□□□□ 0.17
MMP11P24347 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP11P24347 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP11P24347 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
MMP11P24347 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP11P24347 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP11P24347 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP11P24347 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
MMP11P24347 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP11P24347 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP11P24347 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.11■□□□□ 0.17
MMP11P24347 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
MMP11P24347 IGLL3P-201ENST00000412472 434 ntBASIC16.11■□□□□ 0.17
MMP11P24347 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.11■□□□□ 0.17
MMP11P24347 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
MMP11P24347 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP11P24347 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP11P24347 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP11P24347 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP11P24347 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP11P24347 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.11■□□□□ 0.17
MMP11P24347 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP11P24347 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
MMP11P24347 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP11P24347 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP11P24347 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP11P24347 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
MMP11P24347 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
MMP11P24347 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.1■□□□□ 0.17
MMP11P24347 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MMP11P24347 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.1■□□□□ 0.17
MMP11P24347 AC004967.1-201ENST00000453589 447 ntBASIC16.1■□□□□ 0.17
MMP11P24347 OR7E47P-204ENST00000575924 449 ntBASIC16.1■□□□□ 0.17
MMP11P24347 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.1■□□□□ 0.17
MMP11P24347 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.1■□□□□ 0.17
MMP11P24347 AC092865.6-201ENST00000642101 219 ntBASIC16.1■□□□□ 0.17
MMP11P24347 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP11P24347 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.09■□□□□ 0.17
MMP11P24347 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP11P24347 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP11P24347 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP11P24347 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP11P24347 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP11P24347 AGGF1P2-201ENST00000426656 2106 ntBASIC16.09■□□□□ 0.17
MMP11P24347 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
MMP11P24347 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP11P24347 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.09■□□□□ 0.17
MMP11P24347 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.09■□□□□ 0.17
MMP11P24347 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MMP11P24347 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms