Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
ATF7P17544 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.62■□□□□ 0.57
ATF7P17544 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATF7P17544 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.62■□□□□ 0.57
ATF7P17544 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.62■□□□□ 0.57
ATF7P17544 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
ATF7P17544 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.62■□□□□ 0.57
ATF7P17544 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.62■□□□□ 0.57
ATF7P17544 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.62■□□□□ 0.57
ATF7P17544 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.62■□□□□ 0.57
ATF7P17544 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.62■□□□□ 0.57
ATF7P17544 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 AL138688.1-201ENST00000624851 1594 ntBASIC18.62■□□□□ 0.57
ATF7P17544 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.62■□□□□ 0.57
ATF7P17544 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ATF7P17544 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.62■□□□□ 0.57
ATF7P17544 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATF7P17544 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATF7P17544 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF7P17544 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.61■□□□□ 0.57
ATF7P17544 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ATF7P17544 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATF7P17544 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.61■□□□□ 0.57
ATF7P17544 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
ATF7P17544 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ATF7P17544 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ATF7P17544 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ATF7P17544 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.61■□□□□ 0.57
ATF7P17544 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.61■□□□□ 0.57
ATF7P17544 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATF7P17544 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.61■□□□□ 0.57
ATF7P17544 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.61■□□□□ 0.57
ATF7P17544 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.61■□□□□ 0.57
ATF7P17544 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.61■□□□□ 0.57
ATF7P17544 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
ATF7P17544 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATF7P17544 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF7P17544 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATF7P17544 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.6■□□□□ 0.57
ATF7P17544 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF7P17544 AC020916.1-201ENST00000587762 1774 ntBASIC18.6■□□□□ 0.57
ATF7P17544 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.6■□□□□ 0.57
ATF7P17544 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ATF7P17544 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF7P17544 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATF7P17544 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ATF7P17544 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF7P17544 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF7P17544 MIR770-201ENST00000390219 98 ntBASIC18.6■□□□□ 0.57
ATF7P17544 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF7P17544 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.6■□□□□ 0.57
ATF7P17544 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.6■□□□□ 0.57
ATF7P17544 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
ATF7P17544 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF7P17544 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.6■□□□□ 0.57
ATF7P17544 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.6■□□□□ 0.57
ATF7P17544 AC011467.4-201ENST00000594891 528 ntBASIC18.6■□□□□ 0.57
ATF7P17544 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.6■□□□□ 0.57
ATF7P17544 AC068137.2-201ENST00000605408 478 ntBASIC18.6■□□□□ 0.57
ATF7P17544 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATF7P17544 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATF7P17544 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF7P17544 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF7P17544 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATF7P17544 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.6■□□□□ 0.57
ATF7P17544 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms