Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.92■□□□□ 0.78
TOP1P11387 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TOP1P11387 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TOP1P11387 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.92■□□□□ 0.78
TOP1P11387 BCAR1-209ENST00000546196 1340 ntBASIC19.92■□□□□ 0.78
TOP1P11387 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TOP1P11387 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TOP1P11387 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP1P11387 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TOP1P11387 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP1P11387 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TOP1P11387 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TOP1P11387 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
TOP1P11387 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.92■□□□□ 0.78
TOP1P11387 FRMD8P1-201ENST00000440433 1524 ntBASIC19.92■□□□□ 0.78
TOP1P11387 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.92■□□□□ 0.78
TOP1P11387 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP1P11387 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TOP1P11387 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.91■□□□□ 0.78
TOP1P11387 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.91■□□□□ 0.78
TOP1P11387 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.91■□□□□ 0.78
TOP1P11387 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.91■□□□□ 0.78
TOP1P11387 LINC02012-201ENST00000608206 1725 ntBASIC19.91■□□□□ 0.78
TOP1P11387 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 DNAJB3-201ENST00000446806 729 ntBASIC19.91■□□□□ 0.78
TOP1P11387 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.91■□□□□ 0.78
TOP1P11387 KRT19P2-202ENST00000557173 1012 ntBASIC19.91■□□□□ 0.78
TOP1P11387 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 AC023141.13-201ENST00000604991 943 ntBASIC19.91■□□□□ 0.78
TOP1P11387 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.91■□□□□ 0.78
TOP1P11387 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.91■□□□□ 0.78
TOP1P11387 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.91■□□□□ 0.78
TOP1P11387 AC007064.4-201ENST00000637740 555 ntBASIC19.91■□□□□ 0.78
TOP1P11387 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.91■□□□□ 0.78
TOP1P11387 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TOP1P11387 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP1P11387 AC022211.2-201ENST00000585075 2527 ntBASIC19.91■□□□□ 0.78
TOP1P11387 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TOP1P11387 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TOP1P11387 AP001094.4-201ENST00000579008 2176 ntBASIC19.9■□□□□ 0.78
TOP1P11387 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TOP1P11387 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TOP1P11387 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TOP1P11387 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TOP1P11387 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
TOP1P11387 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.9■□□□□ 0.78
TOP1P11387 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP1P11387 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TOP1P11387 MTDHP5-201ENST00000598980 586 ntBASIC19.9■□□□□ 0.78
TOP1P11387 AC006538.3-201ENST00000612495 578 ntBASIC19.9■□□□□ 0.78
TOP1P11387 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.9■□□□□ 0.78
TOP1P11387 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TOP1P11387 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
TOP1P11387 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TOP1P11387 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TOP1P11387 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TOP1P11387 AC025580.3-201ENST00000617932 1424 ntBASIC19.9■□□□□ 0.78
TOP1P11387 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TOP1P11387 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.9■□□□□ 0.78
TOP1P11387 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TOP1P11387 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TOP1P11387 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP1P11387 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP1P11387 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TOP1P11387 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TOP1P11387 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.89■□□□□ 0.78
TOP1P11387 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
TOP1P11387 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
TOP1P11387 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
TOP1P11387 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
TOP1P11387 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TOP1P11387 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TOP1P11387 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TOP1P11387 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TOP1P11387 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.89■□□□□ 0.77
TOP1P11387 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
TOP1P11387 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TOP1P11387 UPF3AP3-201ENST00000420996 769 ntBASIC19.89■□□□□ 0.77
TOP1P11387 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.89■□□□□ 0.77
TOP1P11387 GPX1P2-201ENST00000429271 606 ntBASIC19.89■□□□□ 0.77
TOP1P11387 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.89■□□□□ 0.77
TOP1P11387 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms