Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC175P0C221 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC175P0C221 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC175P0C221 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC175P0C221 AL390719.2-201ENST00000606993 987 ntBASIC18.39■□□□□ 0.53
CCDC175P0C221 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC175P0C221 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC175P0C221 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC175P0C221 KRT18P22-201ENST00000402024 1347 ntBASIC18.39■□□□□ 0.53
CCDC175P0C221 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC175P0C221 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC175P0C221 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC175P0C221 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC175P0C221 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC175P0C221 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC175P0C221 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC175P0C221 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC175P0C221 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC175P0C221 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CCDC175P0C221 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC175P0C221 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC175P0C221 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC175P0C221 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC175P0C221 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC175P0C221 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC175P0C221 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC175P0C221 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC175P0C221 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC175P0C221 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC175P0C221 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC175P0C221 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC175P0C221 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC175P0C221 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC175P0C221 TMEM191A-211ENST00000637163 1067 ntBASIC18.38■□□□□ 0.53
CCDC175P0C221 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC175P0C221 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CCDC175P0C221 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC175P0C221 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC175P0C221 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC175P0C221 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC175P0C221 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC175P0C221 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC175P0C221 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC175P0C221 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC175P0C221 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC175P0C221 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC175P0C221 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC175P0C221 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC175P0C221 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC175P0C221 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC175P0C221 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC175P0C221 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC175P0C221 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC175P0C221 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.37■□□□□ 0.53
CCDC175P0C221 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC175P0C221 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC175P0C221 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC175P0C221 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC175P0C221 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC175P0C221 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC175P0C221 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC175P0C221 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC175P0C221 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC175P0C221 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC175P0C221 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC175P0C221 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC175P0C221 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 AC125634.1-201ENST00000438758 1403 ntBASIC18.36■□□□□ 0.53
CCDC175P0C221 AL359075.1-203ENST00000462729 1002 ntBASIC18.36■□□□□ 0.53
CCDC175P0C221 HLA-J-202ENST00000469281 1241 ntBASIC18.36■□□□□ 0.53
CCDC175P0C221 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC175P0C221 STK19B-204ENST00000512515 211 ntBASIC18.36■□□□□ 0.53
CCDC175P0C221 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC175P0C221 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC175P0C221 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms